MIPS Home MIPS General Information MIPS Grants MIPS Courses MIPS Research MIPS Software MIPS Web Tools MIPS Sitemap
About MIPS MIPS News Faculty & Staff Recent Pubs Directions Facilities Events & Meetings Employment Associated Depts Useful Links
Grant News CCNE-TR CVIS ICMIC ICBP NTROI SMIS
BIOE222 Pharmacokinetics Stats & Data Analysis
BIOE222A F2009 BIOE222B W2009 BIOE222A F2008 BIOE222B W2008 BIOE222A F2007 BIOE222B W2007 BIOE222 F2006 BIOE222 F2005 BIOE222 F2004
Biswal Lab Blankenberg Lab Cheng Lab Contag Lab Felsher Lab Gambhir Lab Graves Lab Guccione Lab Levin Lab Lin Lab McConnell Moseley Lab Paik Lab Plevritis Lab Ramasamy Lab Rao Lab Rutt Lab Schnitzer Lab Vasanawala Lab Willmann Lab Wu Lab Xing Lab
NCIL MRSRL
AMIDE
NucMed Mediabook PET Brain Atlas PET-FDG Whole Body Atlas


Mark Davis
Mark Davis
Associate Member, MIPS
Director, Stanford Institute of Immunity, Transplantation, and Infection
Professor, Department of Microbiology & Immunology
Education:Ph. D., Molecular Biology, Caltech, 1981
B.A., Molecular Biology, The Johns Hopkins University, 1974
Awards:2005 Distinguished Alumni Award - Caltech
2004 Paul Ehrlich Prize - Paul Ehrlich Foundation
2004 Member - National Institute of Medicine
2003 Ernst W. Bertner Award M.D. - Anderson Cancer Center/Univ. Texas
2002 The Rose Payne Award - American Society for Histoocommpatibility and Immunogenetics
2001-present The Burt and Marion Avery Professorship - Stanford University
2000-01 Newton-Abraham Visiting Professor - University of Oxford
2000 Pius XI Award - Pontifical Academy of Sciences
2000 William B. Coley Award - Cancer Research Institute
1998 Novartis Prize for Basic Immunology - International Union of Immunology Societies
1996 General Motors Cancer Prize:Sloan Award - General Motors Cancer Foundation
1995 King Faisal Prize - King Faisal Foundation
1993 Member - National Academy of Sciences
1989 Gairdner Prize - Gairdner Foundation
1988 Howard Taylor Ricketts Award - University of Chicago
1986 Eli Lilly Award in Microbiology and Immunology - American Society of Microbiology
1985 Passano Young Scientist Award - Passano Foundation
1981 Milton and Francis Clauser Doctoral Prize - Caltech
Address:Howard Hughes Medical Institute
Beckman Center B202
279 Campus Drive
Stanford, California, 94305-5323
Phone:(650) 725-4755
E-mail: wheaton@cmgm.stanford.edu
Research Interests:We are interested in the molecular basis of T and B lymphocyte recognition, as well as the control of differentiation and functional responses in these cells. In particular, we have studied the biochemical basis of T cell receptor binding to antigen/MHC complexes and find that the strength of the interactions is a very good predictor of what the resulting T cell response will be. We also find that T cell receptor-peptide/ MHC complexes have an inherent ability to form oligomers and that this could be part of the 'trigger' for T cell activation. One spin-off of these biochemical studies has been the development of tetrameric peptide/MHC reagents which have proven to be generally useful for staining and characterizing antigen-specific T cells in complex mixtures of lymphocytes (i.e. McMichael and Callaghan, J. Exp. Med., 187:1367-1371, 1998). Among other things, we have used these tetramers to follow tumor specific T cells in patients with Melonoma and other cancers. In one patient where we see a substantial number of CD8+ T cells specific for a tumor antigen, the cells have no cytolytic activity and thus seem to have been 'anergized' by the tumor. We are now working with a number of groups that have developed different vaccination strategies to determine which strategies are best able to produce a useful response.

Another important aspect of T cell recognition that is something of a 'black box' is the mystery of what actually happens on the surface of T cell while it is surveying an antigen presenting cell. To investigate this we have made a large series of green fluorescent protein tagged cell surface molecules, expressed them in B or T lymphocytes and followed their movements using multi-color video microscopy. Thus far we find that many key molecules (ICAM-1, CD48, class II, MHC) on the B cell cluster to the interface with a T cell within seconds after the first rise in internal calcium (in the T cell) and the corresponding movement of complimentary membrane molecules on the T cell may be a key factor in the phenomenon of co-stimulation. That is, the augmentation of T cell responses that is characteristic of responses triggered in T cells when B cells, dendritic cells, or macrophages are the antigen presenting cells. Some of these videos can be seen at http://cmgm.stanford.edu/hhmi/mdavis.

Another area of interest is the structural basis of T cell receptor or antibody binding to their respective antigen/MHC or antigenic ligands. For some years we have noted the extreme sequence diversity in the V(D)-J regions of T cell receptors (the CDR3 loops) and proposed that these sequences are primarily responsible for peptide recognition. Recent X-ray structural analysis and other studies support this contention and suggest that the equivalent diverse CDR3 loops in immunoglobulins also play a key role in specificity determination.



crumpnews events